PCA summaries for Dive, Angle, and TrackPlot
PCA summaries
Dive data evaluation
## Importance of components:
## Comp.1 Comp.2 Comp.3
## Standard deviation 1.5916751 0.5668540 0.38111260
## Proportion of Variance 0.8444766 0.1071078 0.04841561
## Cumulative Proportion 0.8444766 0.9515844 1.00000000
##
## Loadings:
## Comp.1 Comp.2 Comp.3
## DT -0.570 -0.674 0.470
## MXD -0.598 -0.800
## L -0.564 0.737 0.373
##
## Comp.1 Comp.2 Comp.3
## SS loadings 1.000 1.000 1.000
## Proportion Var 0.333 0.333 0.333
## Cumulative Var 0.333 0.667 1.000
Angular data evaluation
## Importance of components:
## Comp.1 Comp.2 Comp.3 Comp.4 Comp.5
## Standard deviation 1.5667103 0.9869789 0.9006729 0.62681873 0.6059521
## Proportion of Variance 0.4909163 0.1948255 0.1622423 0.07858034 0.0734356
## Cumulative Proportion 0.4909163 0.6857417 0.8479841 0.92656440 1.0000000
##
## Loadings:
## Comp.1 Comp.2 Comp.3 Comp.4 Comp.5
## Dpit 0.491 0.131 -0.491 0.701
## SumRoll -0.537 0.206 0.609 0.543
## MXPitch -0.542 -0.160 0.237 -0.786
## Apit -0.391 -0.831 -0.287 0.258
## StartHead -0.155 0.973 0.134 -0.105
##
## Comp.1 Comp.2 Comp.3 Comp.4 Comp.5
## SS loadings 1.0 1.0 1.0 1.0 1.0
## Proportion Var 0.2 0.2 0.2 0.2 0.2
## Cumulative Var 0.2 0.4 0.6 0.8 1.0
TP data evaluation
## Importance of components:
## Comp.1 Comp.2 Comp.3
## Standard deviation 1.4094946 0.9999567 0.115807658
## Proportion of Variance 0.6622251 0.3333045 0.004470471
## Cumulative Proportion 0.6622251 0.9955295 1.000000000
##
## Loadings:
## Comp.1 Comp.2 Comp.3
## TPDiveV -0.707 0.707
## TPsurfaceV -0.707 -0.707
## TPturn 1.000
##
## Comp.1 Comp.2 Comp.3
## SS loadings 1.000 1.000 1.000
## Proportion Var 0.333 0.333 0.333
## Cumulative Var 0.333 0.667 1.000
GAMM summaries for Dive, Angle, and TrackPlot
GAMM summaries
Dive data evaluation
##
## Family: gaussian
## Link function: identity
##
## Formula:
## Ax1 ~ TreatmentST + TreatmentType + TreatmentST:TreatmentType +
## s(MaxRL, bs = "ts", k = 5) + s(AvgRL, k = 5, bs = "ts") +
## s(SELcum, k = 5, bs = "ts") + BstatePB
##
## Parametric coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) -1.1766 1.8100 -0.650 0.517
## TreatmentST 1.1862 1.6262 0.729 0.467
## TreatmentType -1.0557 1.1341 -0.931 0.354
## BstatePB -0.5519 0.4010 -1.376 0.171
## TreatmentST:TreatmentType 0.9199 0.9721 0.946 0.346
##
## Approximate significance of smooth terms:
## edf Ref.df F p-value
## s(MaxRL) 2.1888 4 11.755 5.77e-11 ***
## s(AvgRL) 0.9871 4 1.624 0.00871 **
## s(SELcum) 0.3195 4 0.123 0.22328
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## R-sq.(adj) = 0.485
## Scale est. = 1.2302 n = 131
## [1] 461.3926
Dive data evaluation - during
##
## Family: gaussian
## Link function: identity
##
## Formula:
## KAx1dur$Ax1 ~ TreatmentType + BstatePB:TreatmentType + s(MaxRL,
## bs = "ts", k = 5) + s(SELcum, bs = "ts", k = 5) + s(AvgRL,
## k = 5, bs = "ts") + BstatePB
##
## Parametric coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) 1.5348 1.7042 0.901 0.370
## TreatmentType -1.4418 1.3500 -1.068 0.288
## BstatePB -1.5808 1.1288 -1.400 0.164
## TreatmentType:BstatePB 0.8437 0.8091 1.043 0.299
##
## Approximate significance of smooth terms:
## edf Ref.df F p-value
## s(MaxRL) 2.249e+00 4 10.733 1.14e-10 ***
## s(SELcum) 1.114e-07 4 0.000 0.5129
## s(AvgRL) 7.865e-01 4 0.713 0.0565 .
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## R-sq.(adj) = 0.466
## Scale est. = 1.1914 n = 124
## [1] 430.2873
GAMM summaries
Angular data evaluation
##
## Family: gaussian
## Link function: identity
##
## Formula:
## KAngle$Ax1 ~ TreatmentST + TreatmentType + TreatmentST:TreatmentType +
## s(MaxRL, bs = "ts", k = 5) + s(AvgRL, k = 5, bs = "ts") +
## s(SELcum, k = 5, bs = "ts") + BstatePB
##
## Parametric coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) -1.9548 1.7460 -1.120 0.265
## TreatmentST 1.6317 1.6967 0.962 0.338
## TreatmentType -0.4682 1.0726 -0.436 0.663
## BstatePB -0.1814 0.3080 -0.589 0.557
## TreatmentST:TreatmentType 0.4771 1.0191 0.468 0.640
##
## Approximate significance of smooth terms:
## edf Ref.df F p-value
## s(MaxRL) 2.123e+00 4 16.782 1.33e-14 ***
## s(AvgRL) 1.165e+00 4 3.912 0.00012 ***
## s(SELcum) 2.072e-07 4 0.000 0.45822
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## R-sq.(adj) = 0.491
## Scale est. = 1.3912 n = 131
## [1] 467.1679
##
## Family: gaussian
## Link function: identity
##
## Formula:
## KAngledur$Ax1 ~ TreatmentType + BstatePB:TreatmentType + s(MaxRL,
## bs = "ts", k = 5) + s(AvgRL, k = 5, bs = "ts") + s(SELcum,
## k = 5, bs = "ts") + BstatePB
##
## Parametric coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) 0.9135 1.1221 0.814 0.418
## TreatmentType -0.7931 0.9699 -0.818 0.416
## BstatePB -1.0423 0.6958 -1.498 0.139
## TreatmentType:BstatePB 0.7226 0.5382 1.343 0.184
##
## Approximate significance of smooth terms:
## edf Ref.df F p-value
## s(MaxRL) 1.528e+00 4 6.264 1.94e-06 ***
## s(AvgRL) 1.019e+00 4 1.411 0.0168 *
## s(SELcum) 5.023e-09 4 0.000 0.2883
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## R-sq.(adj) = 0.372
## Scale est. = 1.3311 n = 75
## [1] 260.627
Trackplot data evaluation
##
## Family: gaussian
## Link function: identity
##
## Formula:
## KTP$Ax1 ~ TreatmentType + s(MaxRL, k = 5, bs = "ts") + BstatePB
##
## Parametric coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) -1.0200 1.4930 -0.683 0.496
## TreatmentType 1.1297 1.0673 1.058 0.292
## BstatePB -0.5685 0.5896 -0.964 0.337
##
## Approximate significance of smooth terms:
## edf Ref.df F p-value
## s(MaxRL) 4.493e-08 4 0 0.79
##
## R-sq.(adj) = 0.16
## Scale est. = 0.05548 n = 104
## [1] 94.02113
##
## Family: gaussian
## Link function: identity
##
## Formula:
## KTPdur$Ax1 ~ TreatmentType + s(MaxRL, bs = "ts", k = 5) + s(AvgRL,
## bs = "ts", k = 5) + BstatePB
##
## Parametric coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) -3.589 3.624 -0.990 0.333
## TreatmentType 4.067 2.560 1.589 0.126
## BstatePB -2.017 1.568 -1.286 0.212
##
## Approximate significance of smooth terms:
## edf Ref.df F p-value
## s(MaxRL) 7.410e-01 4 0.659 0.107
## s(AvgRL) 5.021e-09 4 0.000 0.510
##
## R-sq.(adj) = 0.521
## Scale est. = 0.025968 n = 26
## [1] 28.79216
Boxplot summaries
Dive data bar plots
MFA dive data bar plots
PRN dive data bar plots
Incorporate prey
Set-up prey-dive relationships
Explore prey-dive relationships
##
## Call:
## lm(formula = maxlunges ~ krilldens)
##
## Residuals:
## Min 1Q Median 3Q Max
## -4.0391 -1.4852 -0.4074 1.5097 4.1252
##
## Coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) 5.416314 1.472584 3.678 0.0104 *
## krilldens -0.006806 0.005247 -1.297 0.2422
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## Residual standard error: 2.795 on 6 degrees of freedom
## Multiple R-squared: 0.219, Adjusted R-squared: 0.08884
## F-statistic: 1.682 on 1 and 6 DF, p-value: 0.2422
##
## Call:
## lm(formula = maxlunges ~ krilldens)
##
## Residuals:
## Min 1Q Median 3Q Max
## -4.0391 -1.4852 -0.4074 1.5097 4.1252
##
## Coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) 5.416314 1.472584 3.678 0.0104 *
## krilldens -0.006806 0.005247 -1.297 0.2422
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## Residual standard error: 2.795 on 6 degrees of freedom
## Multiple R-squared: 0.219, Adjusted R-squared: 0.08884
## F-statistic: 1.682 on 1 and 6 DF, p-value: 0.2422
##
## Call:
## lm(formula = maxlunges ~ krilldens)
##
## Residuals:
## Min 1Q Median 3Q Max
## -4.0391 -1.4852 -0.4074 1.5097 4.1252
##
## Coefficients:
## Estimate Std. Error t value Pr(>|t|)
## (Intercept) 5.416314 1.472584 3.678 0.0104 *
## krilldens -0.006806 0.005247 -1.297 0.2422
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## Residual standard error: 2.795 on 6 degrees of freedom
## Multiple R-squared: 0.219, Adjusted R-squared: 0.08884
## F-statistic: 1.682 on 1 and 6 DF, p-value: 0.2422