ENVS 220 – Topics in Conservation Biology:
Winter 2010

 

 

Instructor – Chris Wilmers, Office hours Thursday 2-4 in ISB 445.

 

Meets:  12:00-1:45 T,Th in Room 455 Interdisciplinary Sciences Building

 

Course overview/expectations

This course is intended as a graduate discussion class covering topics in conservation biology.  Success of the discussions requires participation from all class members.  As such, I anticipate that students will attend all classes, but students may miss one class with no additional assignment.  If a student anticipates missing more than three class sessions they should not take the class.

Required readings

Please do all readings before coming to class.  Readings are available as pdf’s on the course website.

Term paper and presentation

Each student will be asked to write a review paper discussing the literature on a topic in conservation biology as applied to their doctoral research or senior exit requirement.  The format should follow that for submission of a review article for the journal Conservation Biology or any comparable journal.  Papers should be 10-15 double spaced pages.  Instructions to Authors for cons bio are available at http://conbio.net/SCB/Publications/ConsBio/Instructions.  Students will make a brief oral presentation to the group to introduce the paper and set the tone for the discussion. I encourage you to consider the possibility of trying to publish your review.

 

Criteria and timetable for term paper

14 January proposal:  Students will hand in a 1-2 paragraph proposal for the topic, scope, and approach for the paper, including the full citations for at least 3 relevant papers from the literature.  I will review the proposals, offer suggestions, and approve your topics.

3 days before presentation:  Distribute (via email) your best effort draft (one you would feel comfortable submitting to a journal for publication) to everyone in the class. 

Presentation:  Make a 5-30 minute, clear and organized presentation to the class that helps establish the framework for the discussion.  Present your findings, set the tone for the discussion, indicate possible directions for discussion, and highlight areas in which you would particularly like feedback. 

Feedback:  At the presentation, all course members will participate in discussion of the paper, and provide oral feedback.  In addition, for each of the three presentation days, each course members will provide detailed, thoughtful comments on one of the manuscripts (to be assigned). Written comments should be provided to the authors during the session at which the paper is presented.   Comments should focus primarily on content, structure, logic, clarity, and completeness, but notes on grammar, spelling, and format are also helpful.  The job of the reviewer is not to do copy-editing, but rather to provide feedback helpful to the author in producing a better paper.

Rewrite due 7 days after presentation: By one week from the presentation, a revised manuscript should be turned in.  Include a brief cover letter explaining how suggested changes from the reviewers were handled.  Turn in a paper copy, the cover letter, the revised manuscript, and the original comments / draft manuscript.

 

 


ENVS 220 – Topics in Conservation Biology:

Fall 2007

 

Draft syllabus

 

 

Day            Date                             Theme

T                 05 Jan                           Organizational meeting

 

Th               07 Jan                           Biodiversity patterns and loss

T                 12 Jan                           Niche vs. Neutral based theories of biodiversity

Th               14 Jan                           Hot spots and latent risk

 

T                 19 Jan                           Climate change trends and patterns

Th               21 Jan                           Climate envelopes and species interactions

 

T                 26 Jan                           Population viability analysis

Th               28 Jan                           Metapopulation and source sink dynamics

T                 02 Feb                          Fragments and corridors

 

Th               04 Feb                          Predator impacts on ecosystem function and diversity

T                 09 Feb                          People in parks

Th               11 Feb                          Biological invasions

 

T                 16 Feb                          Restoration ecology

Th               18 Feb                          Emerging infectious disease

 

T                 23 Feb                          Bat conservation

Th               25 Feb                          Marine conservation

T                 02 Mar                         Student presentations

 

Th               04 Mar                          Class canceled

T                 09 Mar                          Student presentations

Th               11 Mar                          Student presentations

 

 


Syllabus and reading list

 

 

Topic:         Organizational meeting

 

Topic:         Biodiversity patterns and loss

Readings:    Dirzo, R. and P. H. Raven. 2003. Global state of biodiversity and loss. Annual

                        Review of Environmental Resources 28:1-31.

                  Rosenzweig, M. L. 1992.  Species diversity gradients: we know more and less than

                        we thought.

 

Topic:         Niche vs. Neutral based theories of biodiversity

Readings:    Hubbell, S. P. 2001.  The unified neutral theory of biodiversity and biogeography. 

                        Princeton Univ. Press.  Chaps 1, Chap 2 & Chap 10

                  Leibold, M. A. and McPeek, M. A. 2006. Coexistance of the niche and neutral perspectives in community ecology. Ecology 87:1399-1410

 

 

Topic:        Hot spots and latent risk

Readings:   Myers, N. et al.  2000.  Biodiversity hotspots for conservation priorities.  Nature. 

                        403: 853-858.

                 Cardillo, M. et al.  2006.  Latent extinction risk and the future battlegrounds of

                        mammal conservation.  PNAS. 103: 4157-4161.

                 Brooks, T.M. et al. 2006.  Global biodiversity conservation priorities.  Science. 313:

                        58-61.

 

Topic:         Climate change trends and patterns

Readings :   Terrestrial Ecosystem Adaptation. RFF Report

 

                  Ecological Dynamics Across the Arctic Associated with Recent Climate Change. Post et al. Science 2009

 

Topic:         Climate envelopes and species interactions

Readings:    Kueppers, L. M. et al.  2005.  Modeled regional climate change and California

                        endemic oak ranges.  PNAS.  102:16281-16286.

                  Suttle, K. B. et al. 2007.  Species interactions reverse grassland responses to changing

                        climate.  Science: 640-642.

                  Wilmers, C. C. et al.  2006.  Predator disease out-break modulates top-down, bottom-

                        up and climatic effects on herbivore population dynamics.  Ecology letters. 9:

                        383-389.

                  Schmitz, O. J.  Ecosystem responses to global climate change:  Moving beyond color

                        mapping.  Bioscience. 53:1199-1205.

 

Topic:         Population viability analysis

Readings :    Morris and Doak.  Quantitative conservation biology.  Chap. 6 and Chap 9 part 1 and Chap 9 part 2.

 

                  Crouse et al.  A stage-based population model for loggerhead sea turtles and

                        implications for conservation.  Ecology. 68: 1412-1423.

 

Topic:         Metapopulation and source sink dynamics

Readings:  Ehrlich, PR and DD Murphy. 1987. Conservation lessons from long-term studies of

                        checkerspot butterflies. Conservation Biology 1:122-131.

                  McCarthy , MA . and DB Lindenmayer. 1999. Incorporating metapopulation dynamics

                        of greater gliders into reserve design in disturbed landscapes. Ecology 80: 651-

                        667.

                  Doak DF. 1995. Source-sink models and the problem of habitat degradation: general

                        models and applications to the Yellowstone grizzly. Conservation Biology

                        9:1370-1379.

 

Topic:         Fragments and corridors

Readings:    Debinski, DM, RD Holt. 2000. A survey and overview of habitat fragmentation experiments. Conservation Biology 14:342-355.

Laurance, WF TE Lovejoy, HL Vasconcelos, EM Bruna, RK Didham, PC Stouffer, C Gascon, RO Bierregaard, SG Laurance, and E Sampaio. 2002. Ecosystem decay of Amazonian forest fragments: A 22-year investigation. Conservation Biology 16:605-618.

McRae et al. 2008. Using circuit theory to model connectivity in ecology, evolution and conservation. Ecology: 89: 2712-2724.

Tewksbury et al. 2002. Corridors affect plants, animals, and their interactions in fragmented landscapes. PNAS 99:12923-12926.

 

Topic:         Predator impacts on ecosystem function and diversity

Readings:    Springer, A. M. et al.  2003.  Sequential megafaunal collapse in the North Pacific

                        Ocean: an ongoing legacy of industrial whaling?  PNAS  100: 12223-12228

                  Soule, M.E. et al.  2003.  Ecological Effectiveness:  Conservation goals for interactive

                        species. 17: 1238-1250.

                  Croll, D. A. et al.  2005.  Introduced predators transform subarctic islands from

                        grassland to tundra.  Science.  307:1959-1961.

                  Estes et al 2009. Using ecological function to develop recovery cirteria for depleted species: sea otters and kelp forests in the aleutian archipelago. 

                 

Topic:         People in parks; Making Parks Work revisited

Readings:  Bruner, A.G. et al. 2001. Effectiveness of parks in protecting tropical biodiversity. 

                        Science 291: 125-128.

                  Schmidt-Soltau, K. 2003. Conservation-related resettlement in Central Africa .

                        Development and Change 34:525-551.

                  Nepal , S. K. 2002. Involving indigenous peoples in protected area management:

                        comparative perspectives from Nepal , Thailand and China .  Environmental

                        Management 30:748-763.
Wittemyer et al 2008. Accelerated Human Population Growth at Protected Area Edges. Science

 

Topic:         Biological invasions

Readings:    Mack, RN, D Simberloff, WM Lonsdale, H Evans, M Clout, and FA Bazzaz. 2000. Biotic invasions: Causes, epidemiology, global consequences, and control. Ecological Applications. 10: 689-710.

Parker, IM et al. 1999. Impact: toward a framework for understanding the ecological effects of invaders. Biological Invasions 1: 3-19.

Hierro, JL, Maron, JL, and RM Callaway. 2005. A biogeographical approach to plant invasions: the importance of studying exotics in their introduced and native range. Journal of Ecology. 93: 5-15

 

Topic:         Restoration ecology

Readings :  Palmer, M. A., D. A. Falk, and J. B. Zedler. 2006. Ecological Theory and Restoration Ecology.  Pages 1-10in Foundations of Restoration Ecology. Island Press


Matthews, JW; Peralta, AL; Flanagan, DN; et al. 2009    Relative influence of landscape vs. local factors on plant community assembly in restored wetlands. Ecological Applications, 19 (8): 2108-2123


Jackson, ST; Hobbs, RJ.  2009.  Ecological Restoration in the Light of Ecological History
    SCIENCE, 325 (5940): 567-569


(OPTIONAL) Holl, KD; Crone, EE; Schultz, CB.  2003.  Landscape restoration: Moving from generalities to methodologies BIOSCIENCE, 53 (5): 491-502

 

Topic:       Emerging infectious disease

Readings :  Daszak, P., A. A. Cunningham, and A. D. Hyatt. 2000. Wildlife ecology - Emerging

                       infectious diseases of wildlife - Threats to biodiversity and human health. Science

                       287:443-449.

Harvell, C. D., C. E. Mitchell, J. R. Ward, S. Altizer, A. P. Dobson, R. S. Ostfeld, and M. D. Samuel. 2002. Ecology - Climate warming and disease risks for terrestrial and marine biota. Science 296:2158-2162.

Skerratt et al 2007. EcoHealth

Norris 2006. Conservation In Practice

 

Topic:       Bat Conservation.

Readings :  Jones et al

Blehert

                  Kunz et al

                  Frick et al.

 

 

Topic:       Disease and sea otters in coastal conservation

Readings :  Harvel et al.

Tinker 2008.

                  Johnson et al.